BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H07SP1|AL426603
(565 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1413 972 0.0
>3x_Contig1413
Length = 8782
Score = 972 bits (485), Expect = 0.0
Identities = 543/564 (96%), Gaps = 3/564 (0%)
Strand = Plus / Plus
Query: 1 ttttacagatwttgtctcattatctgaaggaaatgtaaagtttcctatgagttagatgat 60
||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||
Sbjct: 7092 ttttacagaaattgtctcattatctgaaggaaatgaaaagtttcct-tgagatagatgaa 7150
Query: 61 gttcaaaaatcttttgagtttcaacctttgcgtcattacttttctggtttcctttccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7151 gttcaaaaatcttttgagtttcaacctttgcgtcattacttttctggtttcctttccagt 7210
Query: 121 ttctacttctcgattagaacgayagttgattgtgntaccttctttccatatcagaggcga 180
|||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||||
Sbjct: 7211 ttctacttctcgattagaacgaaagttgattgtgataccttctttccat-tc-gaggcga 7268
Query: 181 gggcatcttgcttcaatttcttaaaagaatggtgtggatacggccagtatacttcgctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7269 gggcatcttgcttcaatttcttaaaagaatggtgtggatacggccagtatacttcgctat 7328
Query: 241 cttctcaacgaaatcgatacatggctgccaattcccaaaaggcatacgaagatgcaacct 300
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7329 cttctcaacgatatcgatacatggctgcaaattcccaaaaggcatacgaagatgcaacct 7388
Query: 301 ttgcaacggctttagagtttcaaaaaagcaagctagagaccgttgcacttgaatgcmtga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7389 ttgcaacggctttagagtttcaaaaaagcaagctagagaccgttgcacttgaatgcatga 7448
Query: 361 tcgtgttgtgctcaggagargtttctaaaaccatatatgacaccaacggtctcccaataa 420
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 7449 tcgtgttgtgctcaggagaggtttctaaaaccatatatgacaccaacggtctcccaatac 7508
Query: 421 aaawgtcatttgatattgctggtttactttgctggwttgattcactcttgcacgctccga 480
| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7509 agatgtcatttgatattgctggtttactttgctggattgattcactcttgcacgctccga 7568
Query: 481 awgamaaaataaaaatactcggagtcagagctttgaagacaattcttgaagctaacactt 540
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7569 atgacaaaataaaaatactcggagtcagagctttgaagacaattcttgaagctaacactt 7628
Query: 541 ccaacgttcaacwtatgagggatg 564
|||||||||||| |||||||||||
Sbjct: 7629 ccaacgttcaacttatgagggatg 7652
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3924
Number of Sequences: 1807
Number of extensions: 3924
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 565
length of database: 10,358,551
effective HSP length: 16
effective length of query: 549
effective length of database: 10,329,639
effective search space: 5670971811
effective search space used: 5670971811
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)